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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs234993 chr16:20647644 A/G 5.77E-6 490 15.9 17.47 13.35 KM Plot
THCA rs2353669 chr16:19354212 G/C 1.84E-5 485 16.3 14.28 12.57 KM Plot
THCA rs2354002 chr1:48684283 G/A 6.97E-5 483 17.13 13.8 9.57 KM Plot
THCA rs2354006 chr1:48793051 C/T 7.39E-5 489 17.53 14.8 14.9 KM Plot
THCA rs2354801 chr19:43564248 T/G 0.000237 489 15.3 18.93 10.08 KM Plot
THCA rs2356552 chr1:46009316 T/C 3.74E-8 485 10.6 12.43 16.48 KM Plot
THCA rs2356559 chr1:45981512 A/G 4.08E-5 490 10.6 16.33 16.77 KM Plot
THCA rs2356837 chr16:50120893 C/T 0.000257 490 13.6 16.37 15.67 KM Plot
THCA rs2360029 chr1:119155378 T/A 3.14E-7 490 15.9 15.93 15.17 KM Plot
THCA rs2363096 chr1:41514949 A/G 3.77E-12 488 17.7 17.73 14.93 KM Plot
THCA rs2363097 chr1:41543807 A/G 3.61E-12 489 17.7 17.73 14.93 KM Plot
THCA rs2368701 chr12:49292528 T/C 0.000321 482 16.8 16.2 13.93 KM Plot
THCA rs2373009 chr11:77945815 T/A 6.68E-5 485 16.63 15.67 12.47 KM Plot
THCA rs2374079 chr7:89580280 C/T 0.000172 485 15.75 15.97 31.97 KM Plot
THCA rs2389640 chr7:16479153 G/A 1.82E-9 467 15.63 16.67 17.77 KM Plot